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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888536.1_cds_XP_016443131.1_38321
CDS Infomation

[gene=LOC107768513] [db_xref=GeneID:107768513] [protein=histone deacetylase 5-like isoform X2] [protein_id=XP_016443131.1] [location=join(46010..46110,47714..47912,48405..48551,48660..48772,49035..49246,50303..50367,50940..51026,53741..53851)] [gbkey=CDS]
Sequence

ATGTGTAAGCATTCATGCACAGACGATAATCGCCATCCCGAAAGCCCTAATCGTATCCGT
GCCATCTGGAAAAAGCTCCAGTATTCCGGAGTTACTAATAGATGCCTTATTCTGAATGCA
AAGGAAGCAAGAGATAAAGATATAGAATTGGTTCACACCAAAGGTCACATTAATTTGATT
AAACAAATAAGTTCAGAGAAATTTTCAAGAAGAAAGAGGACTCTTGAGGAGTTTAATTCC
ATATATTTCAATGAAGGCTCATCAGAAGCCGCTTATCTTGCTGCTGGTTCGGTCATTGAG
GTTGCTGAGAAAGTTGCGGAAGGAGAACTGGATTCTGCCTTTGCCATTGTCAGGCCTCCT
GGTCATCATGCTGAAGAAGATGAACCAATGGGATTTTGTCTGTTCAACAATGTTGGTATT
GCAACAAGTTATCTCTTGGATGAAAGAGTTGATCTGGGCATTAAAAAGATTTTGATTGTT
GATTGGGATGTTCATCACGGAAATGGTACTCAAAAAATGTTCTGGAAGGACCCTCGAGTA
CTTTTCTTTTCTGTACATAGGCACGAGTCCGGAAGTTTCTATCCAGATGGTGAAGACGGA
TCACATGTCATGATTGGAGAAGGGCCTGGAGCAGGTTACAACATAAATGTTCCTTGGGAG
AATGCCGGGTGTGATGATGCAGATTATCTTGCTGTATGGGACAATATATTAGTTCCTATT
GCCAAAGAATTCTGCCCTGACCTGATTATGATATCTGCTGGATTTGATGCAGCTATTGGC
GATCCTCTTGGTGAATGTTGTGTTACTCCGTATGGGTATTCTATGATGTTGCACAAGGTA
CGTGATGAATTAAGTGCATTTTGGCCAACGCTTGCTGAGAAATTACCCAAGAAAGTAACT
ATGAAGCGAAATCCTTACATTCAGGAAGCGATGTTGGTGCAAACAAGAAGTCAGTGCAAA
CAAGAAGTCAGTTCAGGAAGAAAAATTGTGAGATGGACTACAAAACATTTCAGCAATACA
ACAGGAGAACAGTAA

Peptide Sequence

PEP ID

XP_016443131.1
PEP Infomation

PREDICTED: histone deacetylase 5-like isoform X2 [Nicotiana tabacum]
Sequence

MCKHSCTDDNRHPESPNRIRAIWKKLQYSGVTNRCLILNAKEARDKDIELVHTKGHINLI
KQISSEKFSRRKRTLEEFNSIYFNEGSSEAAYLAAGSVIEVAEKVAEGELDSAFAIVRPP
GHHAEEDEPMGFCLFNNVGIATSYLLDERVDLGIKKILIVDWDVHHGNGTQKMFWKDPRV
LFFSVHRHESGSFYPDGEDGSHVMIGEGPGAGYNINVPWENAGCDDADYLAVWDNILVPI
AKEFCPDLIMISAGFDAAIGDPLGECCVTPYGYSMMLHKVRDELSAFWPTLAEKLPKKVT
MKRNPYIQEAMLVQTRSQCKQEVSSGRKIVRWTTKHFSNTTGEQ

Transcript Sequence

Gene sequence data has not been registered.